2022-06-02
Team NA
86
44 (51%)
33 (38%)
9 (10%)
Note that the figures for Hela and Jiwaka are combined with those of Southern Highlands and Chimbu because the rnaturalearth
package only allows 20
provinces instead of 22
.
The MalCon Monitoring Dashboard
This MalCon Monitoring Dashboard provides an overview of the progress of the health facility survey 2021
that is being conducted by the Malaria Control Section (MalCon
) at the Papua New Guinea Institute of Medical Research
(PNGMIR
).
This dashboard is built in the framework of reproducibile research using Rmarkdown
and GitHub action workflow
.
Data
The input data for this dashboard is the Data Automation site which is a private repository on GitHub
that is only accessible by the MalCon
team. This repository retrieves daily data updates from the ODK Central
platform hosted by the Swiss TPH
.
The updated data are then being passed through a series of data processing procedures in R
and the final data are displayed as numbers and figures on the dashboard.
Technical Notes
This dashboard is built with R using Rmakrdown and flexdashboard framework, and can easily reproduce by others. The code behind the dashboard available here
GitHub Action Workflow
for automated tasksdocker
for reproducible environmentsrmarkdown
for rendering the dashboard webpageshell
scripting to bridge GitHub Action Workflow
, docker
, and R
git
for version control systemR Packages
dplyr
, and tidyr
for data wranglingflexdashboard
for the dashboard interfaceplotly
and ggplot2
for the plotsrnaturalearth`` and
mapview` for the PNG mapDT
for diplaying tabular dataAcknowledgement
The projects by Rami Krispin inspires this dashboard.